| Protein ZmTRAF15 | |
|---|---|
|
ZmTRAF15 is a protein in the TRAF family.
|
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| Information | |
| Coreg Name: | ZmTRAF15 |
| Species: | Maize |
| Coreg Family: | TRAF |
| Gene Name(Synonym): | |
| Uniprot ID: | B4F998 |
Protein ZmTRAF15
ZmTRAF15 is a protein in the TRAF family.
| Overview of domains present in v5 transcripts | |
|---|---|
| PF00651 | |
| Zm00001eb276280_T001 |  |
| Zm00001eb276280_T002 | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d036840 | DAPseq |  |
sequence | fimo | position |
| Zm00001d036840 | DAPseq |  |
sequence | fimo | position |
| Zm00001d036840 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d036840 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmTRAF15 is the regulator
Interactions where ZmTRAF15 is the target
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Zm00001eb276280_T001 from maize genome v5
Amino Acid Sequence
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MDCCICSPVASVYRLPRNAICAPCHQGAKAIIGFLDRDGEREEDDGGGRSVQLQPRGSAKGLRDAWEQVKEMRAREEETR
QRAAFLQHGFASAWKEGIHTDIVVKPGTGPAIPAHKAILAARSEVFRHMLSGDDRCKAPAGGSISLPELSHDDLSLLLAF
LYTGALEAPGEGGGEASQDQERQLHALLVAADKYDVPFLRRVCEARLAAGVAPRNALRTLEVAELSSSAALMERAMGAVV
EHAEEVVFSAEYERFAARNAGLCVEITRALLARMPTPARSDGPCLELGSS
MDCCICSPVASVYRLPRNAICAPCHQGAKAIIGFLDRDGEREEDDGGGRSVQLQPRGSAKGLRDAWEQVKEMRAREEETR
QRAAFLQHGFASAWKEGIHTDIVVKPGTGPAIPAHKAILAARSEVFRHMLSGDDRCKAPAGGSISLPELSHDDLSLLLAF
LYTGALEAPGEGGGEASQDQERQLHALLVAADKYDVPFLRRVCEARLAAGVAPRNALRTLEVAELSSSAALMERAMGAVV
EHAEEVVFSAEYERFAARNAGLCVEITRALLARMPTPARSDGPCLELGSS
MDCCICSPVASVYRLPRNAICAPCHQGAKAIIGFLDRDGEREEDDGGGRSVQLQPRGSAKGLRDAWEQVKEMRAREEETR
QRAAFLQHGFASAWKEGIHTDIVVKPGTGPAIPAHKAILAARSEVFRHMLSGDDRCKAPAGGSISLPELSHDDLSLLLAF
LYTGALEAPGEGGGEASQDQERQLHALLVAADKYDVPFLRRVCEARLAAGVAPRNALRTLEVAELSSSAALMERAMGAVV
EHAEEVVFSAEYERFAARNAGLCVEITRALLARMPTPARSDGPCLELGSS
MDCCICSPVASVYRLPRNAICAPCHQGAKAIIGFLDRDGEREEDDGGGRSVQLQPRGSAKGLRDAWEQVKEMRAREEETR
QRAAFLQHGFASAWKEGIHTDIVVKPGTGPAIPAHKAILAARSEVFRHMLSGDDRCKAPAGGSISLPELSHDDLSLLLAF
LYTGALEAPGEGGGEASQDQERQLHALLVAADKYDVPFLRRVCEARLAAGVAPRNALRTLEVAELSSSAALMERAMGAVV
EHAEEVVFSAEYERFAARNAGLCVEITRALLARMPTPARSDGPCLELGSS
MDCCICSPVASVYRLPRNAICAPCHQGAKAIIGFLDRDGEREEDDGGGRSVQLQPRGSAKGLRDAWEQVKEMRAREEETR
QRAAFLQHGFASAWKEGIHTDIVVKPGTGPAIPAHKAILAARSEVFRHMLSGDDRCKAPAGGSISLPELSHDDLSLLLAF
LYTGALEAPGEGGGEASQDQERQLHALLVAADKYDVPFLRRVCEARLAAGVAPRNALRTLEVAELSSSAALMERAMGAVV
EHAEEVVFSAEYERFAARNAGLCVEITRALLARMPTPARSDGPCLELGSS
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF00651 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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GTCGCCGTCAGCGGCAACCACCGCG...
GTCGCCGTCAGCGGCAACCACCGCGCGCGCGCGCGTACCAGTTCCGGAAAAAGAAACAGCAGCCTCTGCCCTTCGTTTTTATACGCTCACCCGACGACAGGCGATGGGGGGAACAGCTATAGCCCTGCAGTTAGTAGCATCTCGTTTCAGAGCTCAGAGGAGGGAGGAGGAAGAAGAAGCAGCAGCAAGGCATGGATTGCTGCATCTGCAGCCCCGTGGCGTCCGTGTACAGGCTGCCAAGGAACGCCATCTGCGCTCCCTGCCACCAAGGCGCCAAGGCCATCATCGGTTTCCTCGACAGGGATGGTGAGCGGGAAGAGGACGACGGCGGTGGCCGTTCTGTCCAGCTCCAGCCTCGCGGCTCGGCCAAGGGGCTGAGAGATGCGTGGGAGCAGGTGAAGGAGATGAGAGCCAGGGAGGAGGAGACCAGGCAGAGAGCTGCCTTCCTCCAGCACGGCTTCGCGTCGGCGTGGAAGGAGGGAATCCACACCGACATCGTCGTCAAACCTGGCACCGGTCCCGCGATTCCAGCCCACAAGGCCATCCTGGCCGCGCGGTCGGAGGTGTTCCGGCACATGCTGTCCGGCGACGACCGCTGCAAGGCCCCCGCCGGCGGCTCCATCTCGCTCCCGGAGCTCTCCCACGACGACCTGTCCCTCCTGCTCGCCTTCCTCTACACAGGCGCTCTGGAGGCGCCAGGAGAAGGAGGAGGAGAGGCCAGCCAGGACCAGGAGCGGCAGCTGCACGCGCTCCTCGTCGCGGCCGACAAGTACGATGTGCCGTTCCTGAGGCGGGTCTGCGAGGCGCGGCTGGCGGCGGGCGTGGCGCCCCGGAACGCGCTGCGGACGCTTGAGGTCGCCGAGCTGAGCTCCAGCGCCGCGCTCATGGAGCGCGCCATGGGCGCCGTCGTGGAGCACGCCGAGGAGGTCGTGTTCTCGGCGGAATACGAGCGGTTCGCCGCACGGAACGCGGGGCTGTGCGTCGAGATCACCCGCGCGCTGCTGGCCAGGATGCCGACGCCGGCGAGGAGTGATGGCCCGTGCTTAGAGCTTGGAAGCAGCTAGCTGATGCATGCAGTTGTATTGTATCAGATGATGATGGATCGGAAAGAATACTACTCTTGTTCCAGTTTCGAGTCACGACAATATGTAATTGTAAACGCATAAGTTCTTCTGAAACACGGGCGAGCACGATGAGCAAGACTGCAAGAACAACACAG
GRMZM2G048192_T01 from maize genome v3
Amino Acid Sequence
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MDCCICSPVASVYRLPRNAICAPCHQGAKAIIGFLDRDGEREEDDGGGRSVQLQPRGSAKGLRDAWEQVKEMRAREEETR
QRAAFLQHGFASAWKEGIHTDIVVKPGTGPAIPAHKAILAARSEVFRHMLSGDDRCKAPAGGSISLPELSHDDLSLLLAF
LYTGALEAPGEGGGEASQDQERQLHALLVAADKYDVPFLRRVCEARLAAGVAPRNALRTLEVAELSSSAALMERAMGAVV
EHAEEVVFSAEYERFAARNAGLCVEITRALLARMPTPARSDGPCLELGSS
Nucleotide Sequence
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CCGGAAAAAGAAACAGCAGCCTCTG...
CCGGAAAAAGAAACAGCAGCCTCTGCCCTTCGTTTTTATACGCTCACCCGACGACAGGCGATGGGGGGAACAGCTATAGCCCTGCAGTTAGTAGCATCTCGTTTCAGAGCTCAGAGGAGGGAGGAGGAAGAAGAAGCAGCAGCAAGGCATGGATTGCTGCATCTGCAGCCCCGTGGCGTCCGTGTACAGGCTGCCAAGGAACGCCATCTGCGCTCCCTGCCACCAAGGCGCCAAGGCCATCATCGGTTTCCTCGACAGGGATGGTGAGCGGGAAGAGGACGACGGCGGTGGCCGTTCTGTCCAGCTCCAGCCTCGCGGCTCGGCCAAGGGGCTGAGAGATGCGTGGGAGCAGGTGAAGGAGATGAGAGCCAGGGAGGAGGAGACCAGGCAGAGAGCTGCCTTCCTCCAGCACGGCTTCGCGTCGGCGTGGAAGGAGGGAATCCACACCGACATCGTCGTCAAACCTGGCACCGGTCCCGCGATTCCAGCCCACAAGGCCATCCTGGCCGCGCGGTCGGAGGTGTTCCGGCACATGCTGTCCGGCGACGACCGCTGCAAGGCCCCCGCCGGCGGCTCCATCTCGCTCCCGGAGCTCTCCCACGACGACCTGTCCCTCCTGCTCGCCTTCCTCTACACAGGCGCTCTGGAGGCGCCAGGAGAAGGAGGAGGAGAGGCCAGCCAGGACCAGGAGCGGCAGCTGCACGCGCTCCTCGTCGCGGCCGACAAGTACGATGTGCCGTTCCTGAGGCGGGTCTGCGAGGCGCGGCTGGCGGCGGGCGTGGCGCCCCGGAACGCGCTGCGGACGCTTGAGGTCGCCGAGCTGAGCTCCAGCGCCGCGCTCATGGAGCGCGCCATGGGCGCCGTCGTGGAGCACGCCGAGGAGGTCGTGTTCTCGGCGGAATACGAGCGGTTCGCCGCACGGAACGCGGGGCTGTGCGTCGAGATCACCCGCGCGCTGCTGGCCAGGATGCCGACGCCGGCGAGGAGTGATGGCCCGTGCTTAGAGCTTGGAAGCAGCTAGCTGATGCATGCAGTTGTATTGTATCAGATGATGATGGATCGGAAAGAATACTACTCTTGTTCCAGTTTCGAGTCACGACAATATGTAATTGTAAACGCATAAGTTCTTCTGAAACACGGGCGAGCACGATGAGCAAGACTGCAAGAACAACACAG
GRMZM2G048192_T02 from maize genome v3
Amino Acid Sequence
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MDCCICSPVASVYRLPRNAICAPCHQGAKAIIGFLDRDGEREEDDGGGRSVQLQPRGSAKGLRDAWEQVKEMRAREEETR
QRAAFLQHGFASAWKEGIHTDIVVKPGTGPAIPAHKAILVSGLPAGPNNTSGRRTSWLGRTGPGLFRILNRSSLSAHELH
ARSIRAGRAVGGVPAHAVRRRPLQGPRRRLHLAPGALPRRPVPPARLPLHRRSGGARRRRRRGQPGPGAAAARAPRRGRQ
VRCAVPEAGLRGAAGGGRGAPERAADA
Nucleotide Sequence
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CCGGAAAAAGAAACAGCAGCCTCTG...
CCGGAAAAAGAAACAGCAGCCTCTGCCCTTCGTTTTTATACGCTCACCCGACGACAGGCGATGGGGGGAACAGCTATAGCCCTGCAGTTAGTAGCATCTCGTTTCAGAGCTCAGAGGAGGGAGGAGGAAGAAGAAGCAGCAGCAAGGCATGGATTGCTGCATCTGCAGCCCCGTGGCGTCCGTGTACAGGCTGCCAAGGAACGCCATCTGCGCTCCCTGCCACCAAGGCGCCAAGGCCATCATCGGTTTCCTCGACAGGGATGGTGAGCGGGAAGAGGACGACGGCGGTGGCCGTTCTGTCCAGCTCCAGCCTCGCGGCTCGGCCAAGGGGCTGAGAGATGCGTGGGAGCAGGTGAAGGAGATGAGAGCCAGGGAGGAGGAGACCAGGCAGAGAGCTGCCTTCCTCCAGCACGGCTTCGCGTCGGCGTGGAAGGAGGGAATCCACACCGACATCGTCGTCAAACCTGGCACCGGTCCCGCGATTCCAGCCCACAAGGCCATCCTGGTGAGTGGGCTTCCGGCCGGGCCTAATAATACAAGTGGTCGACGGACGAGTTGGTTGGGCCGGACCGGGCCAGGCCTCTTCCGCATATTAAACCGATCGAGCCTCTCAGCTCACGAACTCCACGCCCGATCCATTCGTGCAGGCCGCGCGGTCGGAGGTGTTCCGGCACATGCTGTCCGGCGACGACCGCTGCAAGGCCCCCGCCGGCGGCTCCATCTCGCTCCCGGAGCTCTCCCACGACGACCTGTCCCTCCTGCTCGCCTTCCTCTACACAGGCGCTCTGGAGGCGCCAGGAGAAGGAGGAGGAGAGGCCAGCCAGGACCAGGAGCGGCAGCTGCACGCGCTCCTCGTCGCGGCCGACAAGTACGATGTGCCGTTCCTGAGGCGGGTCTGCGAGGCGCGGCTGGCGGCGGGCGTGGCGCCCCGGAACGCGCTGCGGACGCTTGAGGTCGCCGAGCTGAGCTCCAGCGCCGCGCTCATGGAGCGCGCCATGGGCGCCGTCGTGGAGCACGCCGAGGAGGTCGTGTTCTCGGCGGAATACGAGCGGTTCGCCGCACGGAACGCGGGGCTGTGCGTCGAGATCACCCGCGCGCTGCTGGCCAGGATGCCGACGCCGGCGAGGAGTGATGGCCCGTGCTTAGAGCTTGGAAGCAGCTAGCTGATGCATGCAGTTGTATTGTATCAGATGATGATGGATCGGAAAGAATACTACTCTTGTTCCAGTTTCGAGTCACGACAATATGTAATTGTAAACGCATAAGTTCTTCTG
Zm00001d036840_T001 from maize genome v4
Amino Acid Sequence
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MDCCICSPVASVYRLPRNAICAPCHQGAKAIIGFLDRDGEREEDDGGGRSVQLQPRGSAKGLRDAWEQVKEMRAREEETR
QRAAFLQHGFASAWKEGIHTDIVVKPGTGPAIPAHKAILAARSEVFRHMLSGDDRCKAPAGGSISLPELSHDDLSLLLAF
LYTGALEAPGEGGGEASQDQERQLHALLVAADKYDVPFLRRVCEARLAAGVAPRNALRTLEVAELSSSAALMERAMGAVV
EHAEEVVFSAEYERFAARNAGLCVEITRALLARMPTPARSDGPCLELGSS
Nucleotide Sequence
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GTCGCCGTCAGCGGCAACCACCGCG...
GTCGCCGTCAGCGGCAACCACCGCGCGCGCGCGCGTACCAGTTCCGGAAAAAGAAACAGCAGCCTCTGCCCTTCGTTTTTATACGCTCACCCGACGACAGGCGATGGGGGGAACAGCTATAGCCCTGCAGTTAGTAGCATCTCGTTTCAGAGCTCAGAGGAGGGAGGAGGAAGAAGAAGCAGCAGCAAGGCATGGATTGCTGCATCTGCAGCCCCGTGGCGTCCGTGTACAGGCTGCCAAGGAACGCCATCTGCGCTCCCTGCCACCAAGGCGCCAAGGCCATCATCGGTTTCCTCGACAGGGATGGTGAGCGGGAAGAGGACGACGGCGGTGGCCGTTCTGTCCAGCTCCAGCCTCGCGGCTCGGCCAAGGGGCTGAGAGATGCGTGGGAGCAGGTGAAGGAGATGAGAGCCAGGGAGGAGGAGACCAGGCAGAGAGCTGCCTTCCTCCAGCACGGCTTCGCGTCGGCGTGGAAGGAGGGAATCCACACCGACATCGTCGTCAAACCTGGCACCGGTCCCGCGATTCCAGCCCACAAGGCCATCCTGGCCGCGCGGTCGGAGGTGTTCCGGCACATGCTGTCCGGCGACGACCGCTGCAAGGCCCCCGCCGGCGGCTCCATCTCGCTCCCGGAGCTCTCCCACGACGACCTGTCCCTCCTGCTCGCCTTCCTCTACACAGGCGCTCTGGAGGCGCCAGGAGAAGGAGGAGGAGAGGCCAGCCAGGACCAGGAGCGGCAGCTGCACGCGCTCCTCGTCGCGGCCGACAAGTACGATGTGCCGTTCCTGAGGCGGGTCTGCGAGGCGCGGCTGGCGGCGGGCGTGGCGCCCCGGAACGCGCTGCGGACGCTTGAGGTCGCCGAGCTGAGCTCCAGCGCCGCGCTCATGGAGCGCGCCATGGGCGCCGTCGTGGAGCACGCCGAGGAGGTCGTGTTCTCGGCGGAATACGAGCGGTTCGCCGCACGGAACGCGGGGCTGTGCGTCGAGATCACCCGCGCGCTGCTGGCCAGGATGCCGACGCCGGCGAGGAGTGATGGCCCGTGCTTAGAGCTTGGAAGCAGCTAGCTGATGCATGCAGTTGTATTGTATCAGATGATGATGGATCGGAAAGAATACTACTCTTGTTCCAGTTTCGAGTCACGACAATATGTAATTGTAAACGCATAAGTTCTTCTGAAACACGGGCGAGCACGATGAGCAAGACTGCAAGAACAACACA
Zm00001eb276280_T002 from maize genome v5
Amino Acid Sequence
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MYIYTSTSCVRTAEICLLSAASSRDAEHGLRDAWEQVKEMRAREEETRQRAAFLQHGFASAWKEGIHTDIVVKPGTGPAI
PAHKAILAARSEVFRHMLSGDDRCKAPAGGSISLPELSHDDLSLLLAFLYTGALEAPGEGGGEASQDQERQLHALLVAAD
KYDVPFLRRVCEARLAAGVAPRNALRTLEVAELSSSAALMERAMGAVVEHAEEVVFSAEYERFAARNAGLCVEITRALLA
RMPTPARSDGPCLELGSS
Nucleotide Sequence
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CCAGCCTCGCGGCTCGGCCAAGGTA...
CCAGCCTCGCGGCTCGGCCAAGGTAACCGCTGCTCACTTGATGATCTGTTCCTTGCGGTTCCTGGTCCAGCTTTTCTTTACGTACGTGTCTGAGTCTTCTTGTCCCACCCGATTGTTCCGTTCCTACGTCACAATCGTAGGATGATGGTTGACGTACGTATGCTTCAACTCAAAGGTATTCTCTAGAATTGATGGCGGGATGCTAACGGATGCTTGAGGTTTGCTTAAGCAACATCGTTACATGTATATATACACTAGTACGTCTTGCGTTAGAACAGCCGAGATTTGCCTTCTTTCTGCAGCCAGCAGCAGGGACGCTGAACATGGGCTGAGAGATGCGTGGGAGCAGGTGAAGGAGATGAGAGCCAGGGAGGAGGAGACCAGGCAGAGAGCTGCCTTCCTCCAGCACGGCTTCGCGTCGGCGTGGAAGGAGGGAATCCACACCGACATCGTCGTCAAACCTGGCACCGGTCCCGCGATTCCAGCCCACAAGGCCATCCTGGCCGCGCGGTCGGAGGTGTTCCGGCACATGCTGTCCGGCGACGACCGCTGCAAGGCCCCCGCCGGCGGCTCCATCTCGCTCCCGGAGCTCTCCCACGACGACCTGTCCCTCCTGCTCGCCTTCCTCTACACAGGCGCTCTGGAGGCGCCAGGAGAAGGAGGAGGAGAGGCCAGCCAGGACCAGGAGCGGCAGCTGCACGCGCTCCTCGTCGCGGCCGACAAGTACGATGTGCCGTTCCTGAGGCGGGTCTGCGAGGCGCGGCTGGCGGCGGGCGTGGCGCCCCGGAACGCGCTGCGGACGCTTGAGGTCGCCGAGCTGAGCTCCAGCGCCGCGCTCATGGAGCGCGCCATGGGCGCCGTCGTGGAGCACGCCGAGGAGGTCGTGTTCTCGGCGGAATACGAGCGGTTCGCCGCACGGAACGCGGGGCTGTGCGTCGAGATCACCCGCGCGCTGCTGGCCAGGATGCCGACGCCGGCGAGGAGTGATGGCCCGTGCTTAGAGCTTGGAAGCAGCTAGCTGATGCATGCAGTTGTATTGTATCAGATGATGATGGATCGGAAAGAATACTACTCTTGTTCCAGTTTCGAGTCACGACAATATGTAATTGTAAACGCATAAGTTCTTCTGAAACACGGGCGAGCACGATGAGCAAGACTGCAAGAACAACACAGTACAGTACAACACGGCGCGTCTCATGTCATCGAGGGTCGAATAGCATGGATTATCTCGGTAGATAGGCGACTGAACATGCCTGAGTTCATGGGACAGGCAACTCTGAATGAGTTGGTTGGTGGTAAAAAGAACAAGTGGTCGGAGTTGCTTCTCCCTCGACCTCGAGTCGAGCCTGAACGACG
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